#noncoding-dna

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#genetics
Health
fromThe Washington Post
2 days ago

One way to live longer: Win the genetic lottery

Genetic factors account for about 50% of human lifespan, significantly higher than the previously estimated 20%.
#aging
fromNature
16 hours ago
OMG science

This method to reverse cellular ageing is about to be tested in humans

Yuancheng Ryan Lu's research on reprogramming retinal nerve cells could lead to restoring eyesight and rejuvenating organs.
fromThe Walrus
2 months ago
Science

What Do Microbes Have to Do with How We Age? Everything, Actually | The Walrus

Microbes profoundly influence human aging and health and represent a promising frontier for interventions to delay age-related decline.
OMG science
fromNature
16 hours ago

This method to reverse cellular ageing is about to be tested in humans

Yuancheng Ryan Lu's research on reprogramming retinal nerve cells could lead to restoring eyesight and rejuvenating organs.
#ai
fromFast Company
1 day ago
Medicine

AI is coming for superbugs

AI can significantly enhance antibiotic discovery, addressing the urgent global health crisis of antibiotic resistance.
fromwww.scientificamerican.com
2 months ago
Artificial intelligence

Cracking DNA's dark matter with AI, surviving two days without lungs, and uncovering a botanical mystery

AlphaGenome, an AI model, predicts DNA segment functions to expand understanding of genetic code and its links to proteins and disease.
Medicine
fromFast Company
1 day ago

AI is coming for superbugs

AI can significantly enhance antibiotic discovery, addressing the urgent global health crisis of antibiotic resistance.
Data science
fromMedium
5 days ago

In-Silico Perturbation Meets Single-Cell Foundation Models: From Zero-Shot Potential to Fine-Tuned...

In-silico perturbation simulates cellular state changes, but biological trustworthiness remains a challenge despite advancements in single-cell foundation models.
#genomics
fromNature
6 days ago
Science

The 1000 Chinese Pangenome empowers medical and population genetics - Nature

fromNature
6 days ago
Science

The 1000 Chinese Pangenome empowers medical and population genetics - Nature

SF parents
fromHigh Country News
1 week ago

A DNA archive critical to identifying missing migrants has itself gone missing - High Country News

Colibrí Center's missing-persons database has become inaccessible, leaving families without hope for identifying missing migrants.
#crispr
Artificial intelligence
fromFortune
2 weeks ago

Could data from 100 million species help cure disease? One startup is betting on it | Fortune

Basecamp Research launches the Trillion Gene Atlas to map genetic diversity across 100 million species, aiming to expand biological knowledge 100-fold through AI-powered genomic data collection.
fromNature
2 weeks ago

Can a mouse be cloned indefinitely? Decades-long experiment has answers

Asexual reproduction is ultimately unsustainable for mice, and potentially other mammals, too. The clones looked normal and lived as long as normal mice. But large mutations - including the loss of an entire chromosome - accumulated in the cloned lineage at an unusually high rate.
OMG science
Science
fromNature
2 weeks ago

Zombieland: Genome transplant brings 'dead' bacteria back to life

Researchers have revived 'dead' bacterial cells by replacing their DNA with a working genome from another species, advancing genome engineering.
fromNature
2 weeks ago

Adaptive evolution of gene regulatory networks in mammalian neocortex - Nature

To characterize CREs and TFs for neocortical ExNs, we used Arpp21-Gfp or Fezf2-Gfp transgenic mice and enriched GFP-expressing neocortical upper layer (L2-4) intratelencephalic (IT) neurons or deep layer (L5-6) predominantly extratelencephalic (ET) neurons, respectively, from neonatal mice (postnatal day (PD) 0), an age at which neocortical ExN identity and connectivity are established.
Roam Research
fromNature
2 weeks ago

In vivo site-specific engineering to reprogram T cells - Nature

Using CRISPR-Cas9 and adeno-associated virus (AAV)-mediated homology-directed repair, we targeted CAR integration into the endogenous human TCR alpha locus (TRAC). TRAC-CAR T cells display dynamic CAR expression that delays exhaustion and improves tumour control in xenograft and immunocompetent models. This work has been critical for the development of allogeneic CAR T cell therapy, as it disrupts the TCR after transgene insertion—a necessary step to limit graft-versus-host disease.
Cancer
OMG science
fromNature
2 weeks ago

How DNA in dirt is shaking up the study of human origins

Ancient DNA can be recovered from sediments, revolutionizing the study of extinct species and the history of ecosystems.
Science
fromNature
2 weeks ago

Synthetic circuits for cell ratio control - Nature

Synthetic biology enables artificial cell differentiation and division of labor by engineering genetic and epigenetic circuits that mimic natural stem cell asymmetric division processes.
Left-wing politics
fromTruthout
1 month ago

Reproductive Tech That Promises Smart Babies Is Peddling Soft Eugenics

Reproductive tech companies now offer embryo genetic screening for intelligence and disease, raising concerns about eugenics, disability discrimination, and wealth-based genetic enhancement.
Science
fromNature
1 month ago

Daily briefing: How DNA testing can tell identical twins apart

Advanced forensic techniques including whole-genome sequencing and epigenetic analysis can differentiate between identical twins in criminal investigations, while GLP-1 drugs show potential in reducing addiction across multiple substances, and researchers have successfully synthesized hexagonal diamond.
fromwww.nature.com
1 month ago

Genetically encoded assembly recorder temporally resolves cellular history

GEMINI leverages a computationally designed protein assembly as an intracellular memory device to record the history of individual cells. GEMINI grows predictably within live cells, capturing cellular events as tree-ring-like fluorescent patterns for imaging-based retrospective readout. Absolute chronological information of activity histories is attainable with hour-level accuracy.
Science
fromArs Technica
1 month ago

Large genome model: Open source AI trained on trillions of bases

Evo 2, an AI system trained on trillions of base pairs from all life domains, can identify genes, regulatory sequences, and splice sites in complex genomes including humans.
Medicine
fromenglish.elpais.com
1 month ago

The very long road from a cancer cure' in mice to one in humans

Promising mouse cancer cures often fail to become safe, effective human drugs; premature media claims can create false patient expectations and hinder responsible research progress.
Philosophy
fromAeon
2 months ago

Groundbreaking visuals capture how our bodies repair damaged DNA | Aeon Videos

Drew Berry creates striking biomedical animations that visualize microscopic biological processes like DNA repair, revealing intricate evolution-shaped cellular mechanisms.
fromNews Center
1 month ago

AI Model May Improve RNA Sequencing Research - News Center

Scientists in the laboratory of Rendong Yang, PhD, associate professor of Urology, have developed a new large language model that can interpret transcriptomic data in cancer cell lines more accurately than conventional approaches, as detailed in a recent study published in Nature Communications. Long-read RNA sequencing technologies have transformed transcriptomics research by detecting complex RNA splicing and gene fusion events that have often been missed by conventional short-read RNA-sequencing methods.
Cancer
fromNature
1 month ago

AI tools can design genomes. Will they upend how life evolves?

Biology is undergoing a transformation. After centuries of studying life as it evolves naturally, researchers are now using a combination of computation and genome engineering to intervene, generating new proteins and even whole bacteria from scratch. The use of artificial-intelligence tools to design biological components, an approach known as generative biology, is set to turbocharge this area of research. Just last year, scientists used AI-assisted design to produce artificial genes that can be expressed in mammalian cells.
Science
Medicine
fromThe Atlantic
1 month ago

Their Mutated Genes Were Supposed to Be Harmless

People who carry single-gene mutations for disorders like thalassemia can experience real health effects, including lethargy and fainting, despite being labeled asymptomatic.
OMG science
fromNature
2 months ago

Regulatory grammar in human promoters uncovered by MPRA-based deep learning - Nature

Massively parallel reporter assays provide cell-type-specific causal training data enabling more direct inference of DNA sequence effects on promoter activity than epigenomic maps.
fromArs Technica
1 month ago

Have we leapt into commercial genetic testing without understanding it?

Martschenko's argument is largely that genetic research and data have almost always been used thus far as a justification to further entrench extant social inequalities. But we know the solutions to many of the injustices in our world-trying to lift people out of poverty, for example-and we certainly don't need more genetic research to implement them. Trejo's point is largely that more information is generally better than less.
Science
Medicine
fromNature
2 months ago

Atlas-guided discovery of transcription factors for T cell programming - Nature

Transcription factors determine CD8+ T cell states; identifying TFs that promote tissue-resident memory versus terminal exhaustion enables engineering of more effective adoptive T cell therapies.
#gene-regulation
Medicine
fromThe Washington Post
1 month ago

David Liu unlocks the power of gene editing to treat rare genetic diseases

Base and prime gene-editing technologies can precisely correct genetic mutations, enabling personalized therapies that can cure life-threatening inherited diseases.
Science
fromNature
2 months ago

Construction of complex and diverse DNA sequences using DNA three-way junctions - Nature

DNA writing remains limited by short oligo synthesis and two-way junction assembly methods, hindering affordable, scalable construction of large, complex synthetic DNA.
#alphagenome
Science
fromNature
2 months ago

An expanded registry of candidate cis-regulatory elements - Nature

The cCRE registry expanded to 2.37 million human and 967,000 mouse elements and integrates functional characterization for over 97% of human cCREs.
Medicine
fromNature
1 month ago

China's biotech boom: why the nation must collaborate to stay ahead

China leads in drug manufacturing and biotech innovation, but geopolitical scrutiny and moves toward a closed biotech ecosystem threaten scientific collaboration and global medicine access.
Science
fromNews Center
2 months ago

New Underlying Mechanisms May Support Proper Transcriptional Regulation and Improve - News Center

New mechanisms controlling transcription initiation and elongation involving BET family proteins were identified, revealing pathways that could enable improved targeted therapies for diseases including cancer.
Science
fromNews Center
2 months ago

Understanding the Link Between Nucleotide Metabolism and Chromatin Assembly - News Center

PRPS enzymes coordinate nucleotide synthesis and early histone maturation, synchronizing DNA replication and chromatin assembly through dual metabolic and regulatory roles.
Science
fromNature
2 months ago

A 'time capsule for cells' stores the secret experiences of their past

Engineered TimeVaults capture and store cellular mRNA to continuously record past transcriptional activity, enabling retrospective study of cellular history and responses.
Science
fromwww.scientificamerican.com
2 months ago

How long you live may depend much more on your genes than scientists thought

Heritability of human lifespan roughly doubles to about 50% when extrinsic mortality is removed, showing a stronger genetic influence on intrinsic aging.
Science
fromNature
2 months ago

RNA-triggered Cas12a3 cleaves tRNA tails to execute bacterial immunity - Nature

Some immune systems inactivate tRNAs to impair viral protein synthesis, and certain Cas nucleases, like LshCas13a, can cleave tRNA anticodon loops.
Science
fromNews Center
2 months ago

New Underlying Mechanisms May Support Proper Transcriptional Regulation and Improve Targeted Therapies - News Center

BET proteins, particularly BRD4, regulate transcription initiation and elongation independently of bromodomains, with implications for targeted therapeutic development.
Science
fromWIRED
2 months ago

He Went to Prison for Gene-Editing Babies. Now He's Planning to Do It Again

He Jiankui created the first gene-edited babies, was jailed and banned, and now seeks to resume controversial genetic research despite widespread germline-editing prohibitions.
fromwww.nature.com
2 months ago

Author Correction: Nutrient-sensing nuclear receptors coordinate autophagy

In the originally published version of this article, Extended Data Fig. 4 contained inadvertent duplications introduced during figure assembly: panel 4c (the bottom of the second column) erroneously reused images from panel 4a (the bottom of the third column); panel 4c (the upper panel of the third column) erroneously reused images from panel 4a (the upper panel of the rightmost column);
Science
Science
fromMail Online
2 months ago

Scientists use AI to create a virus never seen before

Scientists used AI and gene-assembly tools to create Evo-Φ2147, a novel 11-gene virus designed to kill pathogenic E. coli.
Science
fromArs Technica
1 month ago

Tiny, 45 base long RNA can make copies of itself

A 45-base RNA ribozyme can self-replicate, supporting RNA-based origin-of-life scenarios where RNA carried both genetic information and catalytic functions.
Science
fromNature
2 months ago

Developmental convergence and divergence in human stem cell models of autism - Nature

Distinct rare mutations and common genetic variation jointly shape ASD risk, yet convergent molecular pathology and early fetal neurodevelopmental mechanisms can be studied using stem-cell models.
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